GenePageReports file descriptions: FTP_FILE_INVENTORY --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- *) GenePageGeneralInfo_ManuallyCurated.txt File contains general information on all the manually curated gene pages. TSV Echinobase gene ID|gene symbol|gene name|gene function|gene synonyms *) GenePageGeneralInfo_AllGenes.txt File contains general information on all gene pages. TSV Echinobase gene ID|gene symbol|gene name|gene function|gene synonyms *) NcbiProteinEchinobaseGene_spur.txt File contains a list of NCBI S.pur proteins mapped to the appropriate Echinobase genepage ID TSV gi|accession|Echinobase gene ID|Echinobase gene symbol *) NcbiProteinEchinobaseGene_aplan.txt File contains a list of NCBI A.planci proteins mapped to the appropriate Echinobase genepage ID TSV gi|accession|Echinobase gene ID|Echinobase gene symbol *) NcbiMrnaEchinobaseGene_spur.txt File contains a list of NCBI S.pur mRNAs mapped to the appropriate Echinobase genepage ID. TSV gi|accession|Echinobase gene ID|Echinobase gene symbol *) NcbiMrnaEchinobaseGene_aplan.txt File contains a list of NCBI A. planci mRNAs mapped to the appropriate Echinobase genepage ID TSV gi|accession|Echinobase gene ID|Echinobase gene symbol *) GeneGoTerms.txt File contains a list of ECB-GENE IDs mapped to GO terms TSV Echinobase gene ID|gene symbol|GO Ids The list of GO IDs is comma separated *) EchinobaseGeneHumanOrthologMapping.txt File contains a mapping of ECB-GENEPAGE IDs and annotation to human Entrez Gene IDs TSV Human Entrez Gene ID|Echinobase genepage ID|Echinobase gene symbol|Echinobase gene name *) EchinobaseGeneMouseOrthologMapping.txt ile contains a mapping of ECBB-GENEPAGE IDs and annotation to mouse Entrez Gene IDs TSV Mouse Entrez Gene ID|Echinobase genepage ID|Echinobase gene symbol|Echinobase gene name *) EchinobaseGeneZebrafishOrthologMapping.txt File contains a mapping of ECB-GENEPAGE IDs and annotation to zebrafish Entrez Gene IDs TSV Zebrafish Entrez Gene ID|Echinobase genepage ID|Echinobase gene symbol|Echinobase gene name *) EchinobaseGenepageToGeneIdMapping.txt File contains the mapping of ECB-GENEPAGE IDs, the primary identifier for a genepage to ECB-GENE IDs for individual S. pur and A. planci genes. TSV ECB-GENEPAGE ID|ECB-GENE IDs for S. pur and A. planci The ECB-GENE IDs are comma-separated *) LiteratureMatchedGenesByPaper.txt NA TSV Article|pubMedID|genePageId_and_Symbol genePageId_and_Symbol listing comma separated *) GeneKoTerms.txt File contains a list of ECBB-GENE IDs mapped to KEGG terms TSV Echinobase gene ID|gene symbol|KEGG Ids The list of KEGG IDs is comma separated *) GeneExternalRef.txt File contains a list of ECB-GENE IDs with external entities TSV Echinobase gene ID|gene symbol|gene name|NCBI taxon ID|Entrez ID|JGI IDs (delimited)|Uniprot IDs (delimited)|ENSEMBL IDs (delimited) The list of IDs is pipe delimited