LABEL_OLD LABEL BIGWIG TRACKNAME ASSAY STAGE TISSUE PUBLICATION PAPER LAB GSE_ID GSM CAT_HIERARCHY BIN_ID CTRL_BIN_ID STRAIN IS_FOR_BIGWIG SPECIES_VERSION EXT_SPECIES_VERSION SPECIES_VERSION_DBXREF STATUS_LIST STATUS_IDS GSE_ROOT_FOLDER GSE_SPECIES_VER_ROOT_FOLDER GSE_BW_ROOT_FOLDER GSE_TPM_ROOT_FOLDER GSE_DE_ROOT_FOLDER GSE_PEAK_ROOT_FOLDER GSE_README_FILE 1836v1 1438 GSM3772833_1836.bw WE (normal rabbit IgG) ChIP-Seq Khor JM et al. (2019) 47332 GSE131370 GSM3772833 None 1836 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/Readme.txt 1837v1 1439 GSM3772832_1837.bw WE (alx1 Ab2) ChIP-Seq Khor JM et al. (2019) 47332 GSE131370 GSM3772832 None 1837 1836 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE131370/STRPU_5.0/ChIP-Seq/Readme.txt 1849v1 1451 GSM5945021_1849.bw WE (RNA-Seq) RNA-Seq 51284 GSE198320 GSM5945021,GSM5945022,GSM5945023 None 1849 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/Readme.txt 1850v1 1452 GSM5945024_1850.bw WE (RNA-Seq) (tbxt MO) RNA-Seq 51284 GSE198320 GSM5945024,GSM5945025,GSM5945026 None 1850 1849 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/RNA-Seq/Readme.txt 1851v1 1453 GSM5945027_1851.bw WE (ChIP-Seq (tbxt Ab1)) ChIP-Seq 51284 GSE198320 GSM5945027,GSM5945028 None 1851 1852 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/Readme.txt 1852v1 1454 GSM5945029_1852.bw WE (ChIP-Seq (input)) ChIP-Seq 51284 GSE198320 GSM5945029,GSM5945030 None 1852 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE198320/STRPU_5.0/ChIP-Seq/Readme.txt 1844v1 1446 GSM6278508_1844.bw WE (15 hpf) RNA-Seq 51285 GSE207100 GSM6278508,GSM6278514,GSM6278520 None 1844 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1845v1 1447 GSM6278510_1845.bw WE (18 hpf) RNA-Seq 51285 GSE207100 GSM6278510,GSM6278516,GSM6278522 None 1845 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1846v1 1448 GSM6278509_1846.bw WE (15 hpf) (EtOH) RNA-Seq 51285 GSE207100 GSM6278509,GSM6278515,GSM6278521 None 1846 1844 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1847v1 1449 GSM6278511_1847.bw WE (18 hpf) (EtOH) RNA-Seq 51285 GSE207100 GSM6278511,GSM6278517,GSM6278523 None 1847 1845 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1857v1 1459 GSM6278512_1857.bw WE (21 hpf) RNA-Seq 51285 GSE207100 GSM6278512,GSM6278518,GSM6278524 None 1857 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1858v1 1460 GSM6278513_1858.bw WE (21 hpf) (EtOH) RNA-Seq 51285 GSE207100 GSM6278513,GSM6278519,GSM6278525 None 1858 1857 Lytechinus variegatus 1 LV30 LYTVA_3.0 153 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE207100/LYTVA_3.0/RNA-Seq/Readme.txt 1838v1 1440 GSM877249_1838.bw WE 32-cell stage RNA-Seq 32-cell stage Song JL et al. (2012) 42264 GSE35876 GSM877249 None 1838 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1839v1 1441 GSM877250_1839.bw blastula WE RNA-Seq Song JL et al. (2012) 42264 GSE35876 GSM877250 None 1839 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1840v1 1442 GSM877248_1840.bw oocyte RNA-Seq Song JL et al. (2012) 42264 GSE35876 GSM877248 None 1840 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1841v1 1443 GSM877251_1841.bw gastrula WE RNA-Seq Song JL et al. (2012) 42264 GSE35876 GSM877251 None 1841 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1842v1 1444 GSM877247_1842.bw ovary RNA-Seq Song JL et al. (2012) 42264 GSE35876 GSM877247 None 1842 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1843v1 1445 GSM877252_1843.bw pluteus WE RNA-Seq Song JL et al. (2012) 42264 GSE35876 GSM877252 None 1843 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Ready|Loader Wait 10|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE35876/STRPU_5.0/RNA-Seq/Readme.txt 1829v1 1431 GSM946009_1829.bw WE (12 C) RNA-Seq Runcie DE et al. (2012) 42522 GSE38606 GSM946009,GSM946010,GSM946011 None 1829 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/Readme.txt 1830v1 1432 GSM946005_1830.bw WE (18 C) RNA-Seq Runcie DE et al. (2012) 42522 GSE38606 GSM946005,GSM946006,GSM946007,GSM946008 None 1830 1829 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38606/STRPU_5.0/RNA-Seq/Readme.txt 1831v1 1433 GSM730036_1831.bw WE (12 C) microarray Runcie DE et al. (2012) 42522 GSE38644 GSM730036,GSM730037,GSM730038,GSM730039,GSM730040,GSM730041,GSM730042,GSM730043,GSM730044,GSM730045,GSM730046,GSM730047,GSM730048,GSM730049,GSM730050,GSM730051,GSM730052,GSM730053,GSM730054,GSM730055, None 1831 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Readme.txt 1832v1 1434 GSM730098_1832.bw WE (15 C) microarray Runcie DE et al. (2012) 42522 GSE38644 GSM730098,GSM730099,GSM730100,GSM730101,GSM730102,GSM730103,GSM730104,GSM730105,GSM730106,GSM730107,GSM730108,GSM730109,GSM730110,GSM730111,GSM730112,GSM730113,GSM730114,GSM730115,GSM730116,GSM730117, None 1832 1831 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Readme.txt 1833v1 1435 GSM730068_1833.bw WE (18 C) microarray Runcie DE et al. (2012) 42522 GSE38644 GSM730068,GSM730069,GSM730070,GSM730071,GSM730072,GSM730073,GSM730074,GSM730075,GSM730076,GSM730077,GSM730078,GSM730079,GSM730080,GSM730081,GSM730082,GSM730083,GSM730084,GSM730085,GSM730086,GSM730087, None 1833 1831 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE38644/STRPU_5.0/microarray/Readme.txt 1834v1 1436 GSM1973611_1834.bw WE (glycerol) RNA-Seq Wei Z et al. (2016) 44383 GSE76067 GSM1973611 None 1834 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/Readme.txt 1835v1 1437 GSM1973612_1835.bw WE (sox4 MO) RNA-Seq Wei Z et al. (2016) 44383 GSE76067 GSM1973612 None 1835 1834 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Curation Complete|PL Wait|Loader Wait 10|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE76067/STRPU_5.0/RNA-Seq/Readme.txt 1859v1 1461 GSM2391746_1859.bw T-box brain transcription factor 1 WE - mid-gastrula stage ChIP-Seq Cary GA et al. (2017) 45554 GSE89862 GSM2391746 None 1859 1860 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Ready|Loader Wait 9|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Readme.txt 1859v2 1463 GSM2391746_1859.bw T-box brain transcription factor 1 WE - mid-gastrula stage ChIP-Seq Cary GA et al. (2017) 45554 GSE89862 GSM2391746 ChIP-Seq/Transcription Factor/tbr 1859 1860 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Ready|Loader Wait 9|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Readme.txt 1860v1 1462 GSM2391747_1860.bw input WE - mid-gastrula stage ChIP-Seq Cary GA et al. (2017) 45554 GSE89862 GSM2391747 None 1860 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Ready|Loader Wait 9|12|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE89862/STRPU_5.0/ChIP-Seq/Readme.txt 1853v1 1455 GSM2546188_1853.bw WE (Control) DNase-Seq Shashikant T et al. (2018) 46197 GSE96927 GSM2546188,GSM2546189,GSM2546190 None 1853 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Wait|Loader Wait 9|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/Readme.txt 1854v1 1456 GSM2546193_1854.bw Non-PMCs ATAC-Seq Shashikant T et al. (2018) 46197 GSE96927 GSM2546193,GSM2546194 None 1854 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Wait|Loader Wait 9|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/Readme.txt 1855v1 1457 GSM2546191_1855.bw PMCs ATAC-Seq Shashikant T et al. (2018) 46197 GSE96927 GSM2546191,GSM2546192 None 1855 1854 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Wait|Loader Wait 9|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/ATAC-Seq/Readme.txt 1856v1 1458 GSM2546185_1856.bw WE (U0126) DNase-Seq Shashikant T et al. (2018) 46197 GSE96927 GSM2546185,GSM2546186,GSM2546187 None 1856 1853 Strongylocentrotus purpuratus 1 SP50 STRPU_5.0 133 Partial Manual Curation|PL Wait|Loader Wait 9|11|16 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927 ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/BigWigs ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/ExpressionFiles ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/DE_Analysis ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/Called_Peaks ftp.xenbaseturbofrog.org/Genomics/GEO/GSE96927/STRPU_5.0/DNase-Seq/Readme.txt